Data from: Characterization of Adult Transcriptomes from the Omnivorous Lady Beetle Coleomegilla maculata Fed Pollen or Insect Egg Diet
Expressed genes from two individual sibling specimens of Coleomegilla maculata (Coleoptera: Coccinellidae). One individual was fed only insect eggs as an adult, and one was fed only pollen as an adult. Two sequenced samples, total RNA from a single individual adult specimen of Coleomegilla maculata, a beneficial lady beetle common in agroecosystems and native to North America. One sample was an adult fed only insect eggs (carnivore diet) and one sample was an adult fed only pollen (plant-based diet); insects were reared from the same egg mass (siblings), fed identical diet while in larval stage.
BioProject: Coleomegilla maculata strain:inbred Mississippi Transcriptome or Gene expression Taxonomy: Coleomegilla maculata Project data type: Transcriptome or Gene expression Scope: Multiisolate US Department of Agriculture Accession: PRJNA236444 ID: 236444
Resources in this dataset:
Resource Title: Total RNA from individual adult fed only eggs as adult; first one of two files (paired Illumina)..
File Name: filtered_LEO_TGACCA_L002_R1fastq.gz
Resource Description: Two sequenced samples, total RNA from a single individual adult specimen of Coleomegilla maculata, a beneficial lady beetle common in agroecosystems and native to North America. One sample was an adult fed only insect eggs (carnivore diet) and one sample was an adult fed only pollen (plant-based diet); insects were reared from the same egg mass (siblings), fed identical diet while in larval stage. BioProject: Coleomegilla maculata strain:inbred Mississippi Transcriptome or Gene expression Taxonomy: Coleomegilla maculata Project data type: Transcriptome or Gene expression Scope: Multiisolate US Department of Agriculture Accession: PRJNA236444 ID: 236444 Coleomegilla maculata (Coleoptera: Coccinellidae). Common name unassigned, but commonly referred to as Pink Lady Beetle. Native to North America, widespread. Beneficial insect that feeds on spider mites, Lepidoptera eggs, eggs of Colorado potato beetle and many others.
Resource Title: Total RNA sequences from single adult C. maculata fed insect eggs as adult. Second of two (paired Illumina) files..
File Name: filtered_LEO_TGACCA_L002_R2fastq.gz
Resource Description: Two sequenced samples, total RNA from a single individual adult specimen of Coleomegilla maculata, a beneficial lady beetle common in agroecosystems and native to North America. One sample was an adult fed only insect eggs (carnivore diet) and one sample was an adult fed only pollen (plant-based diet); insects were reared from the same egg mass (siblings), fed identical diet while in larval stage. BioProject: Coleomegilla maculata strain:inbred Mississippi Transcriptome or Gene expression Taxonomy: Coleomegilla maculata Project data type: Transcriptome or Gene expression Scope: Multiisolate US Department of Agriculture Accession: PRJNA236444 ID: 236444 Coleomegilla maculata (Coleoptera: Coccinellidae). Common name unassigned, but commonly referred to as Pink Lady Beetle. Native to North America, widespread. Beneficial insect that feeds on spider mites, Lepidoptera eggs, eggs of Colorado potato beetle and many others. Sequenced by U. of Wash http://www.htseq.org/
Resource Title: Total RNA sequenced from one adult lady beetle fed pollen as adult. First of two (paired Illumina) files..
File Name: filtered_PO_CGATGT_L002_R1fastq.gz
Resource Description: Two sequenced samples, total RNA from a single individual adult specimen of Coleomegilla maculata, a beneficial lady beetle common in agroecosystems and native to North America. One sample was an adult fed only insect eggs (carnivore diet) and one sample was an adult fed only pollen (plant-based diet); insects were reared from the same egg mass (siblings), fed identical diet while in larval stage. BioProject: Coleomegilla maculata strain:inbred Mississippi Transcriptome or Gene expression Taxonomy: Coleomegilla maculata Project data type: Transcriptome or Gene expression Scope: Multiisolate US Department of Agriculture Accession: PRJNA236444 ID: 236444 Coleomegilla maculata (Coleoptera: Coccinellidae). Common name unassigned, but commonly referred to as Pink Lady Beetle. Native to North America, widespread. Beneficial insect that feeds on spider mites, Lepidoptera eggs, eggs of Colorado potato beetle and many others. Sequenced by U. of Wash http://www.htseq.org/
Resource Title: Total RNA from pollen-fed adult lady beetle. Second of two (paired Illumina) files..
File Name: filtered_PO_CGATGT_L002_R2fastq.gz
Resource Description: Two sequenced samples, total RNA from a single individual adult specimen of Coleomegilla maculata, a beneficial lady beetle common in agroecosystems and native to North America. One sample was an adult fed only insect eggs (carnivore diet) and one sample was an adult fed only pollen (plant-based diet); insects were reared from the same egg mass (siblings), fed identical diet while in larval stage. BioProject: Coleomegilla maculata strain:inbred Mississippi Transcriptome or Gene expression Taxonomy: Coleomegilla maculata Project data type: Transcriptome or Gene expression Scope: Multiisolate US Department of Agriculture Accession: PRJNA236444 ID: 236444
Funding
USDA-ARS: 6402-22000-062-00D
History
Data contact name
Allen, Margaret L.Data contact email
meg.allen@usda.govPublisher
Ag Data CommonsIntended use
To understand the biology of an important beneficial insect in US agroecosystems. To identify genetic markers associated with diet and nutrition, with an aim to mass produce augmentative biological control organisms that are healthy and fit.Theme
- Not specified
ISO Topic Category
- biota
- environment
- farming
National Agricultural Library Thesaurus terms
genomics; adults; transcriptome; omnivores; Coleomegilla maculata; pollen; diet; genes; Coccinellidae; insect eggs; RNA; agroecosystems; North America; carnivores; plant-based diet; insects; rearing; siblings; larvae; Mississippi; gene expression; taxonomy; USDA; beneficial insects; biological control; nutritional adequacyOMB Bureau Code
- 005:18 - Agricultural Research Service
OMB Program Code
- 005:040 - National Research
ARS National Program Number
- 304
Primary article PubAg Handle
Pending citation
- No
Public Access Level
- Public