Data from: A scalable, low-cost phenotyping strategy to assess tuber size, shape, and the colorimetric features of tuber skin and flesh in potato breeding populations
dataset
posted on 2023-12-18, 20:36authored byMax J. Feldman, Jaebum Park, Nathan Miller, Rich Novy
<p>This data set contains images of potato tubers from clones in the A08241 F1 breeding population grown in Aberdeen, Idaho during the 2019 field season. Each clone was grown as 8-hill plots and replicated twice. Five tubers per sample were imaged. Each face of the tuber was imaged on two different backgrounds. The five tubers were also halved lengthwise and one of side was imaged using a flatbed scanner. </p>
<p>Resources in this dataset:</p>
<ul>
<li>
<p>Resource Title: A08241_scanner_images
File Name: tubers.zip
Resource description: These are images of halved potato tubers collected from clones in the A08241 breeding population using a Hewlett Packard HP ColorJet 6200C flatbed scanner. No color correction was performed on these images.</p>
</li>
<li>
<p>Resource Title: A08241_lightbox_images
File Name: box.zip
Resource description: These are images of potato tubers from the A08241 breeding population captured on a lightbox background using a Nikon D7100 camera. No color correction was performed on these images.</p>
</li>
<li>
<p>Resource Title: A08241_black_background_images
File Name: std.zip
Resource description: These are images of potato tubers from the A08241 breeding population captured on a black background using a Nikon D7100 camera. No color correction was performed on these images.</p>
</li>
<li>
<p>Resource Title: A08241_lightbox_color_corrected_images
File Name: lightbox_color_corrected.zip
Resource description: These are images of potato tubers from the A08241 breeding population captured on a lightbox background using a Nikon D7100 camera. Color correction was performed in MATLAB by Nathan Miller.</p>
</li>
<li>
<p>Resource Title: A08241_black_background_color_corrected_images
File Name: blackbackground_color_corrected.zip
Resource description: These are images of potato tubers from the A08241 breeding population captured on a non-reflective black background using a Nikon D7100 camera. Color correction was performed in MATLAB by Nathan Miller.</p>
</li>
</ul><p></p>
This data was collected for the purpose of trait extraction and QTL mapping. It can also be used to generate machine learning models for feature identification.
Max J. Feldman, Jaebum Park, Nathan Miller, Collins Wakholi, Katelyn Greene, Arash Abbasi, Devin A. Rippner, Duroy Navarre, Cari Schmitz Carley, Laura M. Shannon, and Rich Novy, A scalable, low-cost phenotyping strategy to assess tuber size, shape, and the colorimetric features of tuber skin and flesh in potato breeding populations. The Plant Phenome Journal (in review).
Public Access Level
Public
Preferred dataset citation
Feldman, Max J.; Park, Jaebum; Miller, Nathan; Novy, Rich (2023). Data from: A scalable, low-cost phenotyping strategy to assess tuber size, shape, and the colorimetric features of tuber skin and flesh in potato breeding populations. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1529451