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Complete genome assemblies of foodborne pathogens using MinION sequencing

Name: Complete genome assemblies of foodborne pathogens using MinION sequencing
Published: 2024-06-11T05:56:41+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: genome sequencing and assembly

dataset

posted on 2024-06-11, 05:56 authored by USDA

Sequenced two of the most prominent foodborne pathogens that cause severe human illnesses worldwide, Enterohemorrhagic Escherichia coli O157:H7 and Salmonella enterica subsp. enterica serovar Bareilly with Oxford Nanopore’s MinION sequencer, and the whole genomes of both samples were assembled and polished with only a 0.1% error rate.

Funding

Agricultural Research Service, 6040-32000-064-00D

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-10-26

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA498670

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA498670 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing and assembly

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