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Comparison of next-generation sequencing methods for catfish bacterial microbiota profiling

dataset
posted on 2024-01-27, 05:12 authored by USDA ARS
Compared 3 different 16S rRNA sequencing protocols (two nanopore sequencing protocols targeting full length 16S rRNA gene and Illumina MiSeq on V4 region) for bacterial community profiling in a mock community, hybrid catfish samples (digesta, gill swab, skin swab) and water samples (pond water and holding tank).

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-04-29

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA833472

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