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Comparison of fecal microbiome of diarrheic and non-diarrheic calves revealed unique community structure of the calf intestine through metagenomics approach

dataset
posted on 2024-06-11, 05:07 authored by Chattogram Veterinary and Animal Sciences University
We endeavored to use modern metagenomic approaches to investigate the bacterial community structuresassociated with diarrhea in young calves older than six months. After 16S rRNA amplicon sequencing, diversity analyses were carried out to compare the microbial composition of feces from diarrheal calves to that of healthy calves. Here, we observed significantly less bacterial richness in the non-diarrheic calve's feces than in the diarrheic calve's feces. Comparing the gut microbiomes of calves with and without diarrhea, we revealed significant differences in microbial community composition.

Funding

U.S. Department of Agriculture, 0101-2017

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2023-11-07

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA1036396

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1036396 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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