Comparative genomics of 194 Salmonella enterica

dataset

posted on 2024-11-23, 21:39 authored by Agricultural Research Service, United States Department of Agriculture

This genome sequencing project is a collaboration among lab groups at the University of California-Irvine (UCI), The Genome Institute at Washington University in St. Louis and the Bacterial Epidemiology and Antimicrobial Resistance Research Unit (BEAR-RU) at the United States Department of Agriculture. This dataset consists of draft genomes of 194 diverse Salmonella. BEAR-RU analyzed these sequences for genetic variation and genomic context of antibiotic resistance genes. UCI is analyzing these sequences to investigate the evolutionary history of Salmonella.

Funding

USDA-ARS: 6612-32000-006-00

USDA: 2009-03579

NIH: AI077645

NIH: AI075093

NIH: AI073971

NIH: AI039557

Binational Agricultural Research and Development Fund: IS-4671-13CR

NIH: AI052237

USDA: 2011-67017-30127

NIH: HHSN272200900040C

NIH: AI083646

Center for Produce Safety: 2013-280

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2016-05-16

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

Public Access Level

Public

Accession Number

PRJNA254816

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA254816 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Salmonella enterica eBacteria genome sequencing

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