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Comparative genomics of 194 Salmonella enterica

dataset
posted on 2024-06-11, 05:18 authored by Agricultural Research Service, United States Department of Agriculture
This genome sequencing project is a collaboration among lab groups at the University of California-Irvine (UCI), The Genome Institute at Washington University in St. Louis and the Bacterial Epidemiology and Antimicrobial Resistance Research Unit (BEAR-RU) at the United States Department of Agriculture. This dataset consists of draft genomes of 194 diverse Salmonella. BEAR-RU analyzed these sequences for genetic variation and genomic context of antibiotic resistance genes. UCI is analyzing these sequences to investigate the evolutionary history of Salmonella.

Funding

U.S. Department of Agriculture, 2009-03579

U.S. Department of Agriculture, 2011-67017-30127

Center for Produce Safety, 2013-280

Agricultural Research Service, 6612-32000-006-00

National Institutes of Health, AI039557

National Institutes of Health, AI052237

National Institutes of Health, AI073971

National Institutes of Health, AI075093

National Institutes of Health, AI077645

National Institutes of Health, AI083646

National Institutes of Health, HHSN272200900040C

Binational Agricultural Research and Development Fund, IS-4671-13CR

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2016-05-15

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA254816

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA254816 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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