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Colletotrichum shisoi FDWSRU 21-072 genome annotations

dataset
posted on 2025-04-14, 15:42 authored by Michael R. Fulcher, Glen Groben

Colletotrichum shisoi is a fungal plant pathogen of Perilla frutescens, a mint species cultivated in some Asian countries but considered invasive in the United States. This dataset contains a new, highly contiguous genome sequence generated from the North American C. shisoi isolate FDWSRU 21-072, which has been proposed for use as a biological control agent of invasive P. frutescens. Long-read PacBio sequencing produced a genome assembly of 48 contigs and 86.9 Mb. Structural and functional gene annotations were generated with the FunAnnotate v1.8.16 pipeline.

Funding

USDA-ARS: 8044-22000-047-000-D

History

Data contact name

Fulcher, Michael, R

Data contact email

michael.fulcher@usda.gov

Publisher

Ag Data Commons

Temporal Extent Start Date

2025-03-19

Theme

  • Non-geospatial

ISO Topic Category

  • farming

National Agricultural Library Thesaurus terms

Colletotrichum; plant pathogenic fungi; Perilla frutescens; mint; data collection; nucleotide sequences; biological control agents; invasive species; genome assembly; genes

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 304

ARIS Log Number

425124

Pending citation

  • Yes

Public Access Level

  • Public