Cochliomyia macellaria Genome sequencing and assembly

dataset

posted on 2025-04-26, 03:58 authored by USDA-Agricultural Research Service, USA, U.S. Department of Agriculture Agricultural Research Service Knipling-Bushland U.S. Livestock Insects Research Laboratory

A reference assembly and a maternal haplotype were generated using the trio-binning approach. A North Carolina State University (NC State) strain male was mated with a Kerrville (Texas) strain female. The parents were sequenced using a NextSeq 2000 (150 PE). A single F1 male was sequenced using PacBio HiFi.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2025-03-17

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA1237386

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1237386 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Cochliomyia macellaria eEukaryotes genome sequencing and assembly eSequence eAssembly