- No file added yet -

Chromatin accessibility analysis in bovine gamma delta T cells following BCG immunization

Name: Chromatin accessibility analysis in bovine gamma delta T cells following BCG immunization
Published: 2024-09-29T07:18:18+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-09-29, 07:18 authored by Iowa State University

BCG vaccine is known to induce trained immunity in humans and mice. We aimed to study the same in the bovine species. Trained immunity is influenced by the epigenetic reprogramming of innate immune cells, keeping certain regions in the chromatin accessible and ready to release effectors. ATAC sequencing reveals those open regions of the chromatin. Therefore, in this study, we compare the chromatin states of the BCG immunized and control groups.

Funding

USDA: R01 HD099104-01

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-07-12

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA1135310

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1135310 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

Keywords

raw sequence reads

Licence

Exports

RefWorks

BibTeX

Ref. manager

Endnote

DataCite

NLM