posted on 2023-12-18, 18:40authored byMeng Mao, Gaelen Burke
<p>The Official Gene Set cheins_OGSv1.0 is an integration (<a href="https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Chelonus_insularis/100/">NCBI Chelonus insularis Annotation Release 100</a>) from NCBI's eukaryotic annotation pipeline v8.4 with manual annotations (via the Apollo manual annotation software). QC and Merge of the dataset was performed using the GFF3toolkit software (<a href="https://github.com/NAL-i5K/GFF3toolkit">https://github.com/NAL-i5K/GFF3toolkit</a>). </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Chelonus insularis Official Gene Set OGSv1.0.</p> <p>File Name: cheins_OGSv1.0.tar.gz</p><p>Resource Description: The attached tar.gz archive (cheins_OGSv1.0.tar.gz) contains the following files:</p>
<p>cheins_OGSv1.0_cds.fa. CDS sequences of Chelonus insularis genome annotations OGSv1.0.</p>
<p>cheins_OGSv1.0_pep.fa. Amino acid sequences of Chelonus insularis genome annotations OGSv1.0.</p>
<p>cheins_OGSv1.0_trans.fa. Transcript sequences of Chelonus insularis genome annotations OGSv1.0.</p>
<p>cheins_OGSv1.0.gff. Gff3 of all gene predictions of Chelonus insularis genome annotations OGSv1.0</p>
<p>ID_map_report.txt. A mapping file describing ID and name updates from dataset NCBI Chelonus insularis Annotation Release 100.</p>
<p>readme. This file briefly describes how the dataset Chelonus insularis Official Gene Set OGSv1.0 was generated.</p>
<p>proviral_segments_Cins.gff3. Gff3 file of the boundaries of proviral segments int he Chelonus insularis genome.</p></li></ul><p></p>