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Characterizing and exploring variation in the bacterial and fungal tare soil microbiome of the seed potato

dataset
posted on 2024-01-27, 00:13 authored by Oregon State University HAREC
This study seeks to characterize the microbiome of tare soils on seed potato tubers and explore variability in microbial community composition related to different seed lot sources. Overall, we used ITS and 16S metabarcoding to characterize the microbial communities present in 130 tare soils of commercially produced seed potatoes used for potato production in Oregon. The project is a step towards understanding the potato microbiome and factors which influence it, with the goal of enhancing our knowledge of plant-microbial relationships to eventually inform management decisions to promote healthy crops

Funding

United States Dept of Agriculture, 1023942

National Institute of Food and Agriculture, 2017-68008-26496

National Institute of Food and Agriculture, 2018-51181-28704

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-03-24

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA716820

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