posted on 2024-02-13, 12:59authored byAlfred M. Handler, Alexie Papanicolaou, Richard A. Gibbs, Kim C. Worley, Shwetha C. Murali, Sandra L. Lee, Donna M. Muzny, Hsu Chao, Huyen Dinh, Harshavardhan Doddapaneni, Jiaxin Qu, Shannon Dugan-Perez, Yi Han, Stephen Richards
<p>The Baylor College of Medicine has sequenced and annotated the <i>Ceratitis capitata</i> genome as part of the i5k pilot project. This dataset presents the <i>Ceratitis capitata</i> genome v1.1. This assembly version is the pre-release version, prior to filtering and quality control by the <a href="https://www.ncbi.nlm.nih.gov/assembly/GCA_000347755.2">National Center for Biotechnology Information's GenBank resource</a>. This dataset is free for all use. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Ceratitis capitata genome assembly v1.1.</p> <p>File Name: cercap_BCM_assembly_v1-0.tar.gz</p><p>Resource Description: The attached tar archive contains the scaffolds, contigs, and agp file for the <em>Ceratitis capitata</em> 1.1 assembly.</p>A description of the agp format is available here: <a href="http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml">http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml</a><p></p><p></p></li></ul><p></p>
Funding
National Human Genome Research Institute: U54 HG003273
Handler, Alfred M.; Papanicolaou, Alexie; Gibbs, Richard A.; Worley, Kim C.; Murali, Shwetha C.; Lee, Sandra L.; Muzny, Donna M.; Chao, Hsu; Dinh, Huyen; Doddapaneni, Harshavardhan; Qu, Jiaxin; Dugan-Perez, Shannon; Han, Yi; Richards, Stephen (2019). Ceratitis capitata genome assembly v1.1. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1503813