Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

Capra hircus breed:San Clemente Genome sequencing and assembly

dataset
posted on 2024-01-27, 04:57 authored by USDA ARS
This is a de novo assembly of the domestic goat (Capra hircus) exclusively using long reads. The assembly was scaffolded using a combination of optical map data, and Hi-C contact alignment graphs. Subsequent scaffolding was confirmed using a Radiation Hybrid map for the goat. This study was a proof of principle that a combination of cutting edge sequencing technologies can be used to efficiently create accurate chromosome-scale scaffolds.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2016-08-11

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA290100

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC