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Campylobacter coli Genome sequencing and assembly

dataset
posted on 2024-01-27, 00:04 authored by USDA
Campylobacter strains were collected as part of a survey study of fresh chicken carcasses sold in Pennsylvania farmer markets. Four presumptive Campylobacter coli strains from the survey were observed to have unique sequence variations in their gyrase subunit B genes compared to the other collected Campylobacter strains. The four strains were sequenced and analyzed to produce annotated whole genome sequences each consisting of a single closed chromosome. The sequencing was performed to confirm the species of the strains and to determine if there were any other significant sequence differences between the four strain and other Campylobacter coli strains.

Funding

U.S. Department of Agriculture, Agricultural Research Service CRIS project no. 8072-42000-082-00D

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-09-22

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA662386

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