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Brucella sp. B13-0095 Genome sequencing and assembly

dataset
posted on 2024-06-11, 05:28 authored by USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories
This isolate (B13-0095) was isolated from a Pac-Man frog (Ceratophyrs ornate) in a Veterinary Hospital in Texas. It was found that B13-0095 belongs to a group of early-diverging brucellae with traits that depart significantly from those of the ‘classical’ Brucella spp. and that includes B. inopinata strain BO1 (human breast implant infection) and the B. inopinata-like strain BO2 (chronic pneumonia in human). Analysis of B13-0095 whole genome sequence revealed several specific features that suggest that this isolate may represent a missing evolutionary link between a soil associated ancestor and the host adapted ‘classical’ species. These include the ability to use the osmoprotective molecule ectoine or the plant-derived compound rhamnose as a carbon source. It was also found that, like strain BO2, B13-0095 does not produce the typical, perosamine based, LPS that is considered as an essential virulence factor in Brucella. Despite this, B13-0095 has a very fast intracellular replication rate in both epithelial cells and macrophages. Finally, another major finding in this study is the bacterial motility observed for strains B13-0095, BO1 and BO2, which is remarkable for this genus.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2016-09-22

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA326393

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA326393 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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