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BarSeq quantification of Dickeya transposon mutant fitness in potato stem

Name: BarSeq quantification of Dickeya transposon mutant fitness in potato stem
Published: 2024-06-11T06:45:29+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:45 authored by USDA-ARS

We tested barcoded transposon insertion libraries of the bacterial plant pathogens Dickeya dadantii 3937 and D. dianthicola ME23 in potato stems. These strains are capable of causing soft rot in potato. See PMID: 25968644 for plasmid reference, and TnSeq / BarSeq protocols.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-10-18

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA772181

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It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA772181 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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