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BPMV-VIGS targeting iron related genes in Clark (Glycine max)

dataset
posted on 2024-09-29, 06:42 authored by USDA
We used bean pod mottle virus (BPMV) vectors to perform virus induced gene silencing (VIGS) on the soybean (Glycine max) cultivar Clark. Six BPMV-VIGS vectors we created targeting three genes individually, two combinations of two genes in the same vector, and an empty vector to serve as a control. The three individual genes were GmGLU1 (Glyma.03G128300), GmARR4 (Glyma.03G130000), and GmbHLH38 (Glyma.03G130400 and Glyma.03G130600). We used the Gibson Assembly method to create two vectors that combined GmARR4+GmGLU1 or GmbHLH+GmGLU1 in order to target two genes simultaneously. All plants were grown in iron sufficient hydroponics.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-11-03

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA777456

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA777456 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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