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Aspergillus flavus parental and progeny ddRADseq dataset

dataset
posted on 2024-01-26, 23:34 authored by North Carolina State University
Aspergillus flavus is a plant pathogenic fungus which produces the carcinogenic mycotoxin aflatoxin and acts as an economic burden both within the United States and globally. It has recently been discovered to go through the sexual cycle, but little is known about the way this influences the genomic landscape. To understand genetic heritability in A. flavus, we sequenced three populations composed of the two parental strains and approximately 70 F1 progeny strains with double digest restriction associated DNA sequencing and aligned them to the Aspergillus oryzae RIB40 reference genome to identify SNP markers.

Funding

National Institute of Food and Agriculture, 2013-68004-20359

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-04-22

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA534054

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