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Aspergillus flavus Genome sequencing and assembly

dataset

posted on 2024-09-29, 05:41 authored by USDA ARS

The genomes of the three strains of Aspergillus flavus with demonstrated utility for the biological control of aflatoxin were sequenced. These sequences were assembled with MIRA and annotated with Augustus using A. flavus strain 3357 (NCBI EQ963472) as reference. Each strain had a genome of 36.6 MB, a G+C content of 48.3% and had approximately 11 thousand genes mapped to strain 3357. This whole genome sequence is valuable for basic biological, agricultural, and epidemiological research by facilitating the identification of specific strains.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2017-10-04

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA402039

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA402039 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Aspergillus flavus eEukaryotes genome sequencing and assembly

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