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Arabidopsis thaliana cultivar:Columbia, 189, 144 Transcriptome or Gene expression

dataset
posted on 2024-06-11, 07:29 authored by Beltsville Agricultural Research Service- USDA-IBBL
RNASeq analysis - Response of Arabidopsis Col-0 and two tDNA insertion mutants of the C2H2 Q-type zinc finger transcription factor Zat18 ( Zat18-AT3G53600) to infestation by the chewing insect cabbage looper (Trichoplusia ni (Hübner). 27 RNA-Seq runs with 3 bio reps for each time point for each genotype. The organism is Arabidopsis thaliana. The ecotype is Col-0 and Salk mutants 132289C (aka 289 although unfortunately listed as 189 on the output for the RNA-Seq) and 027144C (aka 144). 27 RNA-Seq runs with 3 bio reps for each time point(0h,1h,4h) for each genotype.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-09-12

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA565160

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA565160 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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