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Arabidopsis Root RNA-Seq

dataset
posted on 2024-01-27, 00:12 authored by Michigan State University
Microbial promotion of plant growth has great potential to improve agricultural yields and protect plants against pathogens and/or abiotic stresses, while also relieving economic and environmental costs of crop production. Research on several Mortierellaceae species have been published this past decade, however, the extent of the plant growth promotion (PGP) phenotype(s) and the underlying mechanism(s) of association are still not well understood. In this study, we focused on the symbiosis between soil fungus Linnemannia elongata and Arabidopsis thaliana Col-0, as both organisms have reference genomes and transcriptomes available, and their lifestyles and growth requirements are conducive to research conditions. We measured Arabidopsis aerial growth at early and late life stages, seed production, and used mRNA sequencing to characterize differentially expressed plant genes in response to fungal inoculation.

Funding

National Science Foundation, DEB 1737898

National Institute of Food and Agriculture, MICL02416

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-02-22

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA704083

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