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Antibiotic effects on the swine intestinal microbiome

dataset

posted on 2024-06-11, 06:17 authored by USDA-ARS

The goal of this study was to evaluate the influence of antibiotics on swine intestinal microbial communities. Our approach was to assess the microbial communities of medicated and unmedicated pigs by using shotgun sequencing on fecal genomic DNA. We show that antibiotic resistance genes increase in abundance and diversity in the swine microbiome in response to antibiotic treatment.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2010-11-01

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

metagenomics; sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA59781

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA59781 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

gut metagenome eOther

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