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Anoplophora glabripennis genome assembly v1.0

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posted on 2024-02-15, 17:21 authored by Duane MckennaDuane Mckenna, Richard A. Gibbs, Kim C. Worley, Shwetha C. Murali, Sandra L. Lee, Donna M. Muzny, Hsu Chao, Huyen Dinh, Harshavardhan Doddapaneni, Jiaxin Qu, Shannon Dugan-Perez, Yi Han, Stephen Richards
<p>The Baylor College of Medicine, in collaboration with the McKenna Laboratory at the University of Memphis, has sequenced, assembled and annotated the <i>Anoplophora glabripennis</i> genome as part of the i5k pilot project. This dataset presents the <i>Anoplophora glabripennis</i> genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the <a href="https://www.ncbi.nlm.nih.gov/assembly/GCA_000390285.1">National Center for Biotechnology Information's GenBank resource</a>. If you wish to use this dataset, please follow the <a href="https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use">Baylor College of Medicine's conditions for data use</a>. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Anoplophora glabripennis genome assembly v1.0.</p> <p>File Name: anogla_BCM_assembly_v1-0.tar.gz</p><p>Resource Description: The attached tar archive contains the scaffolds, contigs, and agp file for the <em>Anoplophora glabripennis</em> 1.0 assembly.</p>A description of the agp format is available here: <a href="http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml">http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml</a><p></p><p></p></li></ul><p></p>

Funding

National Human Genome Research Institute: U54 HG003273

National Science Foundation: 1355169

History

Data contact name

McKenna, Duane D.

Data contact email

dmckenna@memphis.edu

Publisher

Ag Data Commons

Theme

  • Not specified

ISO Topic Category

  • biota

Ag Data Commons Group

  • Insects - i5K

National Agricultural Library Thesaurus terms

genomics; genome; biotechnology; genome assembly; Anoplophora glabripennis

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

McKenna, Duane D.; Gibbs, Richard A.; Worley, Kim C.; Murali, Shwetha C.; Lee, Sandra L.; Muzny, Donna M.; Chao, Hsu; Dinh, Huyen; Doddapaneni, Harshavardhan; Qu, Jiaxin; Dugan-Perez, Shannon; Han, Yi; Richards, Stephen (2018). Anoplophora glabripennis genome assembly v1.0. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1439439

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