Angus Sequence Dataset Collection
Whole genome sequence data for Bovidae Bos taurus - beef Angus, 30 animals in total. The data is in "fastq" format. There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is attached. In the diagram, the two reads would correspond to read 1 and read 3.
Resources in this dataset:
Resource Title: CSU_136201_SampleSheet.csv - list of all Angus sequence files.
File Name: CSU_136201_SampleSheet.csv
Resource Description: This spreadsheet lists all 210 data files associated with the sequencing of these 30 Angus animals
Resource Title: Sequence Reads Diagram.
File Name: SequenceReads.png
Resource Description: There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. In the diagram, the two reads would correspond to read 1 and read 3.
Funding
Agricultural Research Service
History
Data contact name
Blackburn, HarveyData contact email
harvey.blackburn@usda.govPublisher
Ag Data CommonsTemporal Extent Start Date
2012-01-01Temporal Extent End Date
2012-12-31Theme
- Not specified
Geographic Coverage
{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[-106.56610600168,41.222307724193]},"type":"Feature","properties":{}}]}Geographic location - description
John E. Rouse-Colorado State University Beef Improvement Center, WYISO Topic Category
- biota
- farming
National Agricultural Library Thesaurus terms
nucleotide sequences; Bovidae; cattle; beef; Angus; germplasmOMB Bureau Code
- 005:18 - Agricultural Research Service
OMB Program Code
- 005:040 - National Research
ARS National Program Number
- 101
Pending citation
- No
Public Access Level
- Public