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Amblyomma maculatum Koch, 1844 Transcriptome or Gene expression

dataset
posted on 2024-01-27, 05:10 authored by National Institute of Allergy and Infectious Diseases
The sialotranscriptome of the adult female Amblyomma maculatum (Gulf Coast) tick. The goal of this project was to sequence, assemble and annotate a cDNA library from the salivary glands of adult female Amblyomma maculatum ticks fed for 2-9 days on a sheep. 1,626,969 pyrosequences (raw data on SRA036543.2) were assembled into 190,646 contig, 72,441 of which were larger than 149 nt. 15,814 coding sequences were extracted from contigs having 5 or more reads. These coding sequences were annotated and compared to other tick sialotranscriptomes in a hyperlinked Excel spreadsheet.

Funding

U.S. Department of Agriculture, 2007-35607-20200

National Institute of Allergy and Infectious Diseases, ZIA AI000810-14

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2011-08-17

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA72241

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