File(s) stored somewhere else
Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.
Amblyomma maculatum Koch, 1844 Transcriptome or Gene expression
dataset
posted on 2024-06-11, 06:39 authored by National Institute of Allergy and Infectious DiseasesThe sialotranscriptome of the adult female Amblyomma maculatum (Gulf Coast) tick. The goal of this project was to sequence, assemble and annotate a cDNA library from the salivary glands of adult female Amblyomma maculatum ticks fed for 2-9 days on a sheep. 1,626,969 pyrosequences (raw data on SRA036543.2) were assembled into 190,646 contig, 72,441 of which were larger than 149 nt. 15,814 coding sequences were extracted from contigs having 5 or more reads. These coding sequences were annotated and compared to other tick sialotranscriptomes in a hyperlinked Excel spreadsheet.
Funding
U.S. Department of Agriculture, 2007-35607-20200
National Institute of Allergy and Infectious Diseases, ZIA AI000810-14
History
Data contact name
BioProject Curation StaffData contact email
bioprojecthelp@ncbi.nlm.nih.govPublisher
National Center for Biotechnology InformationTemporal Extent Start Date
2011-08-17Theme
- Non-geospatial
ISO Topic Category
- biota
National Agricultural Library Thesaurus terms
transcriptome; gene expressionPending citation
- No
Public Access Level
- Public