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Agricultural soil microbiomes using two sampling strategies

dataset
posted on 2024-01-26, 23:29 authored by University of Minnesota
In this study we sought to determine whether composite samples - often analyzed as a low cost and effort alternative to replicated individual samples - provide representative summary estimates of microbial communities. At three Minnesota agricultural research sites planted with an oat cover crop, we conducted amplicon sequencing for soil bacterial and fungal communities (16SV4 and ITS2) of replicated individual or homogenized composite soil samples. We compared soil microbiota from within and among plots and then among agricultural sites using both sampling strategies.

Funding

U.S. Department of Agriculture, 2017-67012-26109

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-11-27

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA507292

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