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A Novel Grape Downy Mildew Resistance Locus from Vitis rupestris

Name: A Novel Grape Downy Mildew Resistance Locus from Vitis rupestris
Published: 2024-06-11T06:17:33+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:17 authored by USDA-ARS

This study represents the QTL mapping efforts for downy mildew resistance in grapevine using a wild V. rupestris x V. riparia F1 mapping family. Genotyping by sequencing was used to generate genome wide SNP markers based on the APEK1 restriction sites in the grape genome. Curation of raw data through alignment to the published grape genome, and subsequent quality filtering, resulted in a core set of markers in this family. A genetic map was produced and the phenotype of downy mildew resistance was assessed for QTL.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-12-09

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA594331

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA594331 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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