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16s rRNA of Honey Bee Queen Microbiota: Mouthparts, Midgut, Ileum & Rectum

Name: 16s rRNA of Honey Bee Queen Microbiota: Mouthparts, Midgut, Ileum & Rectum
Published: 2024-06-11T06:48:37+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:48 authored by United States Department of Agriculture

Here we explore early honey bee queen gut microbial colonization and succession. We sample freshly mated queens from two US based breeders at receipt (approximately 24 days old) and after being established at the head of their own colony or stored in a queen bank.We perform deep sequencing of four alimentary tract niches that differ in many ways including physiological function, pH, and oxygen exposure. To accompany each amplicon library, we determine the absolute numbers of bacteria with qPCR

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-01-26

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA800753

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA800753 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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