11 Ophiostomatales genomes and 1 Microascales genome Genome sequencing and assembly

dataset

posted on 2024-11-23, 21:51 authored by University of Montana

Using Illumina and PacBio technology we sequenced 11 genomes from the fungal orders Ophiostomatales and 1 Microascales to study aspects of fungal farming symbiosis. One of these genomes is that of the laurel wilt pathogen Raffaelea lauricola, responsible for massive death of Red Bay trees in the U.S. South East. We used the resulting data set to produce a well-resolved phylogeny for the Ophiostomatales and dated nodes to determine the age of cultivar lineages.

Funding

NSF: IAA-1443108

USDA: 2013-67011-21113

NSF: DGE-1313190

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2017-07-24

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA395605

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA395605 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing and assembly raw sequence reads transcriptome Genome sequencing and assembly eRawSequenceReads

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