Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

0 and 10 day after inoculation (dai) of Glycine max leaves infected with Phakopsora pachyrhizi

dataset
posted on 2024-06-11, 05:08 authored by Soybean Genomics / Improvement Lab (SGIL), USDA
Primary leaves of three-weeks-old soybean plants cultivar Williams 82 were inoculated with a Mississippi isolate of Phakopsora pachyrhizi (MS06-1). The first trifoliate leaves were collected 15 seconds after inoculation, used as a time-zero, and 10 days after inoculation. RNA was isolated and extracted from the infected leaves and cDNA libraries were constructed. cDNA was then sequenced on an Illumina platform. Reads in this study did not map to the Glycine max genome.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2012-03-19

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA104959

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA104959 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC